rs33100585 SNP Detail

Summary

• ID
  rs33100585
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:101293966 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTTTCAGAT GTCATGAGCA
  GCTGAGGCTC TGAGCTTCAC GGGGTCTGAG ACATAGCTCA ATTCTAGGGC TTGCCCTCTA
  AGGTTCTTGA ATGGTTTAGG TTTTCAGGAC TTTTATATCT CATCCTTGGA CGTGTGGTGT
  GAAAACAGAC TGCTGTCATC ATAACAAGGT CCTTTGAAAT CCAGAAAGAA CAGCCCCATC
  R
  ATCAAGATAT CATTCTCATT AGTCTCTTTC TAGCCTATTG CCTTCGGATT ACCACAGGCT
  GCCAGCAGAG ATGTAGGACC ACAATTAGTA AAGTATTACT ACAGATGCAG GGTGCAGCGT
  GATAGATGCA ATTAAGATTC GCACACAAGC ATGCACATGC ATCTCCTCAG CGCTGCAGCA
  TTCCAGGCTC CTGTCAGAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45237686	mCV24390246	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss320428366	CHEV_2_101303778	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33100585					SNP	A	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:101293966 () rs orientation: forward

Symbol	Name	Function Class
Rr561500	regulatory region 561500	843 bp distal
Rr561501	regulatory region 561501	856 bp proximal