rs33092804 SNP Detail

Summary

• ID
  rs33092804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:84198442 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAAACTGTTC TTCACATAAA AAGTAGCAAT AATGACTCCT
  AATGACATTC TGCAATACAC ATAGGTCAGT GCCTTGTTCC GCCATTATCA GAGAAGCTTC
  Y
  GCCTGCAGCA GATGGGGACA AATATAAGAC CCACAGCCAG ACATTATGCA AAGAATGAAA
  ACTTGGAACA CTAAGCCATA AATGGGATGT CTCTATCAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45236126	mCV23284103	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146829656	ENSMUSSNP4444797	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss320371133	CHEV_2_84208255	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33092804					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:84198442 () rs orientation: forward

Symbol	Name	Function Class
Calcrl	calcitonin receptor-like	Intron
Rr560240	regulatory region 560240	1032 bp distal
Rr560241	regulatory region 560241	1192 bp proximal