rs33072906 SNP Detail

Summary

• ID
  rs33072906
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:20964957 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCAC CTTCTGTTCT TTGCACAATG
  Y
  CTTCCCTGCC ACTATGCACC ATATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45233904	mCV23553476	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss146342414	ENSMUSSNP4202661	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33072906					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:20964957 () rs orientation: forward

Symbol	Name	Function Class
Arhgap21	Rho GTPase activating protein 21	Intron
Rr552639	regulatory region 552639	1938 bp distal
Rr552640	regulatory region 552640	779 bp distal
Rr552641	regulatory region 552641	within coordinates
Rr552642	regulatory region 552642	1160 bp proximal
Rr552643	regulatory region 552643	1771 bp proximal