rs33067105 SNP Detail

Summary

• ID
  rs33067105
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151865934 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACTACTCT TCGTTGCTGT
  GGCATCTCTC CATATCAGGA GTTTGAACAG CTCTAGATGC TGTCCTAGTC TTACAGAATC
  TTATTCTGGA CATCTCCTGA AGTCACGCAG CAAGTCAGGA ACCCATCTTT CTCCTCACCC
  CTCTCTGAAG CCTGGGAAGT AGACTCAGGA ATGCTCACAG TACCCTGGAA TCACTCACTA
  Y
  GCTGTGTCCC GGGCCCAGAG GAAGAAGGCT GCCAAGCACG AAGCTTTTCA ACACCTGATA
  GTACTGGCTC ACTCGTGTTT CTAATGTTAC CTGGTCAGGG AGGGGGTGCT TGCTTTATTC
  CTGGTGGACA GCTACCTCTG TCTGCCCCGT GTCTGCCATT CTGTCATCAC AGGGGATCTT
  GGTGGATGCT AGTCTCTGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45233402	mCV23078912	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss147960919	ENSMUSSNP1998783	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
ss320561842	CHEV_2_151849750	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33067105					SNP	T	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151865934 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	within coordinates
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567261	regulatory region 567261	1797 bp distal
Rr567262	regulatory region 567262	1601 bp distal
Rr567263	regulatory region 567263	390 bp proximal
Rr567264	regulatory region 567264	587 bp proximal