rs33065572 SNP Detail

Summary

• ID
  rs33065572
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143744474 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGGATATATT ATATGAGGGA GGAGATCTAT TTCTGTTTTA
  TATTTTCTTT CATTCATTTA TTTATTTAAG ATTTACTTTA TGTAGGTGAG TACACTGTAG
  Y
  TGTCTTCAGA AACACATCAG ATCCCATTAC AGATGGTTGT GAACCACCAT ATGGTTGCTG
  GGGATTGAAC TCAGGACCTC TGGAAGAGCA ATCAGTGCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45233034	mCV24514979	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	T
ss147774446	ENSMUSSNP2882216	ENSEMBL	ENSEMBL_Sanger	f	SNP		T			T
ss320535017	CHEV_2_143728290	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33065572					SNP	T	T	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143744474 () rs orientation: forward

Symbol	Name	Function Class
Rr566331	regulatory region 566331	1182 bp distal
Rr566332	regulatory region 566332	903 bp proximal