rs33063509 SNP Detail

Summary

• ID
  rs33063509
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:131480828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAAGTCTAG GCCAGAGTGA AGTGTGACCT GGTCTAGGAG
  GTACAGGTTT CTCAGTAGAG TGAGCTGTAC AACCAGGGAA AAAGATAGGA GATGGGCCCC
  Y
  CAGAAGTCCT GCAAACCCCT GTTTTTAGCT TCCCATGGTC TCTGCTATAT TAAGAAAGGG
  GCTAGGACAG CTCTGTGATC CTCAGAAAGG CACATAGAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45232807	mCV25124287	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss320507634	CHEV_2_131464644	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33063509					SNP	C	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131480828 () rs orientation: forward

Symbol	Name	Function Class
Rr373874	regulatory region 373874	975 bp downstream
Rr565298	regulatory region 565298	126 bp proximal