rs33054483 SNP Detail

Summary

• ID
  rs33054483
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172197915 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTAG AGGCCTCTTG TCCCAAGAGG
  W
  TAGACTTCCA CTCAGGCATG TTCTC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45231632	mCV23771693	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	A
ss148314498	ENSMUSSNP7038486	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		A
ss320618312	CHEV_2_172181495	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33054483					SNP	T	T	T	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172197915 () rs orientation: forward

Symbol	Name	Function Class
Aurka	aurora kinase A	195 bp downstream
Fam210b	family with sequence similarity 210, member B	246 bp downstream
Rr571656	regulatory region 571656	576 bp distal
Rr571657	regulatory region 571657	within coordinates