rs33052975 SNP Detail

Summary

• ID
  rs33052975
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:103672998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTA CAAATGAAAT AGAAGATGCC
  R
  CTGGTTGTCC TCCCAGTGGG TGTCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45231686	mCV22333317	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss320442901	CHEV_2_103682810	CHEVERUD	SCREENING_POP	f	SNP				G	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33052975					SNP	A	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103672998 () rs orientation: forward

Symbol	Name	Function Class
Gm13879	predicted gene 13879	762 bp downstream
Gm56364	predicted gene, 56364	765 bp downstream
Gm75184	predicted gene, 75184	within coordinates
Rr373620	regulatory region 373620	within coordinates
Rr373621	regulatory region 373621	1037 bp upstream
Rr561947	regulatory region 561947	3 bp distal