rs33036012 SNP Detail

Summary

• ID
  rs33036012
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:53457874 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTAGAATCT ATTCTCTAAG
  GCTGAACTCA GTTGGTCAAA TCAAGAACAC TCTAAGGCTT TATATGAGAC TGTGTTCTCA
  GATATACTTG TTATTAAACC CCACCTTCAT GTACTTATGG TTCTTTACAA GGTTTGTGAA
  ATGTACTGCT TTAACTACTA GATGCAGAAG CCAAATGAAT GCCCATAGGA CTCCAGAGAA
  Y
  ATGCAAAAAA TGTTTGTCAG AAAAAACTAT AACTTTTAGT ATTTTTGAGC AACAAGTAAA
  TATATATGTT AACAGACATA CATGTGTGCA TATAACTATC AAATTACAAA GGTGTGGCTT
  AATATTTCAT TGTACTTTGC CAGTACAATG AAATTCTGTT TACCTTATTA TCAATAATTA
  GCTTGCATAA TTTTAAAACA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46226716	mCV24471510	ABI	CRAMUS_MOUSE	f	SNP		C				T		T
ss60613049	NES16309435	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	T	T		C	T	T	C	C	T	C	T
ss144884301	ENSMUSSNP2242285	ENSEMBL	ENSEMBL_Sanger	f	SNP		C						T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33036012					SNP	C	C	T	T	T	T	C	T	T	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60613049	NES16309435	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:53457874 () rs orientation: forward

Symbol	Name	Function Class
D8Mit230	DNA segment, Chr 8, Massachusetts Institute of Technology 230	755 bp proximal
Gm23666	predicted gene, 23666	1569 bp upstream