rs33035068 SNP Detail

Summary

• ID
  rs33035068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:152659363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGATGGGC TCTACAGAGA
  CCCTGTTTCA AAACAAGGTG AAATGGCTGA GACTACAGAC TGAGGAAGAA GACTTGCACA
  GCAGGCTTAA TGCCCTGGGT TCAACCTCCA GCATACAGGG TAGGAAAAGA ACAAAGACGC
  CTTCATGTTC CATATCTTCC GAACAGGTAA TAGCACTGAA AACTGTCTAC TATAGGTCAG
  R
  CAGAAAGCTG AATGGTCTAC ACTCGACACA GTCATTCTCT CAAAAAATAG TGGCCAAATG
  TTACCAAATT CCAAACATTC TGCTAGATGC TGATAATAAA GGAAAACTTT CAAGACAAAA
  GCAAATACTC TGTGAGCTTA AGTTTCCCTG AATTAGACAG TAAACATGTA AACATGGGTA
  GCCTCTGGGG AAGTGAGACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45228474	mCV27575754	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss147974907	ENSMUSSNP184137	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33035068					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152659363 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Bcl2l1	BCL2-like 1			Intron
				Noncoding-Transcript-Variant
Rr1128	regulatory region 1128			within coordinates
Rr367334	regulatory region 367334			976 bp downstream
Rr367335	regulatory region 367335			767 bp downstream
Rr567481	regulatory region 567481			1270 bp proximal