rs33034735 SNP Detail

Summary

• ID
  rs33034735
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:108475314 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGTCC TAAATGAGCA TGACATACAA
  M
  ACATGCTCAC AAGCACAACT CCAAA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45728369	mCV22674993	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A	C
ss147188583	ENSMUSSNP985719	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C		C
ss321252712	CHEV_4_108290722	CHEVERUD	SCREENING_POP	f	SNP						C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33034735					SNP	C	C	C	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:108475314 () rs orientation: forward

Symbol	Name	Function Class
Cc2d1b	coiled-coil and C2 domain containing 1B	1823 bp upstream
Cpgi14562	CpG island 14562	1224 bp proximal
Gm12743	predicted gene 12743	within coordinates
Rr597201	regulatory region 597201	207 bp proximal
Rr597202	regulatory region 597202	676 bp proximal
Rr597203	regulatory region 597203	1722 bp proximal
Rr597204	regulatory region 597204	1834 bp proximal
Tssr38307	transcription start site region 38307	1808 bp upstream
Tssr38308	transcription start site region 38308	1892 bp upstream