rs33033629 SNP Detail

Summary

• ID
  rs33033629
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:148216101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCAGCATCA TGAATAGTAA CAAACTATTA CTGTCTTGAG
  CCACGAACAT TTTAAATTGG TTTATTATAG ACAATCGCTC ACTGGAACAC ATAGCCCATC
  R
  GAGCTATGTA TTAGCTCATC CACAGTTAGC CCTGACTGTT CAGACCTGGG AATAGCATCC
  TACTTGCAGA AAAACATGTC CTAAGGCTAT GAAACATTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45228557	mCV24014782	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss147923721	ENSMUSSNP5095923	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33033629					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:148216101 () rs orientation: forward

Symbol	Name	Function Class
Rr566885	regulatory region 566885	1642 bp distal
Rr566886	regulatory region 566886	within coordinates
Rr566887	regulatory region 566887	1244 bp proximal
Rr566888	regulatory region 566888	1329 bp proximal
Rr566889	regulatory region 566889	1710 bp proximal