rs33032839 SNP Detail

Summary

• ID
  rs33032839
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:151866688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGACTTGTC TGGATGGCCA
  TTATTCAGCC TCCTGCAGTG GCCACGGGGC ACTTTTCTGA TTGATGGGCA TGCTCTATGT
  AGAGACTGTG GCTAGTCTGC ACCATTGTCA TGTTGTGGCC CTGTACCCAG GGTGCTCACT
  GTGCTGGCCC TGCTTACAGT ATAACCATCA AGTTCTTGGT GGGTCATGGC TTCCTCTGCT
  M
  GTGTCCGAGA GAAAGTCTGA CGATTGCAAC TGGATATGCC TACAGCAGCA ACATGCCACC
  ATTCTGTGGC TAGCCCTCCT GAGCTCTGCC GGAGTTCCCA GAGGCTGGAA ACACTGTCCA
  CCTTGGAACC AGGAGGGCGA TCATCTGGGA TGCCCTGGCC TGATGGGGGA GGGGAAAGCA
  TGGTGCTACA GAGGAAAATG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45227982	mCV23078877	ABI	CRAMUS_MOUSE	f	SNP	C	A	A	A
ss147960969	ENSMUSSNP1650533	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A		A
ss320561854	CHEV_2_151850504	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33032839					SNP	C	A	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:151866688 () rs orientation: forward

Symbol	Name	Function Class
Gm75398	predicted gene, 75398	460 bp upstream
Gm75402	predicted gene, 75402	within coordinates
Rr374074	regulatory region 374074	within coordinates
Rr567263	regulatory region 567263	343 bp distal
Rr567264	regulatory region 567264	within coordinates