rs33032470 SNP Detail

Summary

• ID
  rs33032470
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:109136928 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCT GTTTCAAATC CCCTATTCAC
  R
  CAATTTTTTA AAAAAGTATT TAGGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45728632	mCV24667088	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss147195863	ENSMUSSNP754213	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss321253761	CHEV_4_108952336	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33032470					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109136928 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14571	CpG island 14571	206 bp proximal
Eps15	epidermal growth factor receptor pathway substrate 15	537 bp upstream
Gm40225	predicted gene, 40225	within coordinates
Rr398389	regulatory region 398389	278 bp upstream
Rr597299	regulatory region 597299	within coordinates
Rr597300	regulatory region 597300	401 bp proximal
Rr597301	regulatory region 597301	692 bp proximal
Rr597302	regulatory region 597302	714 bp proximal
Rr597303	regulatory region 597303	1039 bp proximal
Tssr38334	transcription start site region 38334	535 bp upstream
Tssr38335	transcription start site region 38335	585 bp upstream
Tssr38336	transcription start site region 38336	634 bp upstream