rs33031920 SNP Detail

Summary

• ID
  rs33031920
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:94446507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTA GTATTGAGAT TATTGGCATG
  Y
  AACACCTGGC CTAATTTATG TAAAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss45728808	mCV23922812	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C
ss147049653	ENSMUSSNP2694102	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C
ss321211515	CHEV_4_94224961	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs33031920					SNP	T	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:94446507 () rs orientation: forward

Symbol	Name	Function Class
Caap1	caspase activity and apoptosis inhibitor 1	1474 bp upstream
Gm10306	predicted gene 10306	1192 bp downstream
Rr595335	regulatory region 595335	984 bp distal
Rr595336	regulatory region 595336	262 bp proximal
Rr595337	regulatory region 595337	1200 bp proximal
Tssr42442	transcription start site region 42442	1468 bp upstream