rs33031809 SNP Detail

Summary

• ID
  rs33031809
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:106650554 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GAAGCTTACA GGCTAAGCCA AATGTCACCT ACTCCAAGAA
  GCCTACCTGG ACCCCTCTTG AGTGATGAGG GCCACCTCAG CCTTCTTCGG CCACAGTCTA
  R
  CCACGATGTC TTTATCAGTT TATACCCACC TGAATTGTCC CATCAGCCTA GGGGCCCTAG
  AGGACAGGTC TGGCCTGGCT CATGCCAATG TTCCCAAAG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45728335	mCV23881968	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	G	A
ss147171925	ENSMUSSNP2535916	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33031809					SNP	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106650554 () rs orientation: forward

Symbol	Name	Function Class
Acot11	acyl-CoA thioesterase 11	Intron
Rr596813	regulatory region 596813	1843 bp distal
Rr596814	regulatory region 596814	340 bp distal
Rr596815	regulatory region 596815	903 bp distal
Rr596816	regulatory region 596816	655 bp proximal
Rr596817	regulatory region 596817	844 bp proximal