rs33031639 SNP Detail

Summary

• ID
  rs33031639
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:104354702 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGGGAGTGG CACTATTAGG
  AAGTGTGGTC TTTTTGGAGT AGAGGTGGTC TTATTGGAGG AAGTGGAATT ATTGGGGGCA
  GGTTTTGAGG TCTCCTATGC TCAAGCTATG TCCAATGTAA CACACAGTCT GTCCTTGTTG
  CCTTTTTCAG ATCAAGATGT AGAACTCTCA GCTCTGTCTC CGGCACCATG GTGGCCCAAA
  Y
  GCCACCACGT TTCCTGTCTT GACAATAATG GACTAAACTT CTGAAACTGT AAGCCAGTCC
  CAATTAAATG TTCTCTTTTA TAAGAATTTA CATGTGGGTT GAAGAGATGG TTCAATGGTT
  AAGAGAACTG GCTGCTCTTC CAAAGGACCT GGGTTCAGTT CCAGCACTCA CATGGCAGCT
  CACAACTGTC TGTAACTTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45228432	mCV23468625	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss147150214	ENSMUSSNP2795826	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C		C
ss320444800	CHEV_2_104364514	CHEVERUD	SCREENING_POP	f	SNP						T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33031639					SNP	T	T	C	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:104354702 () rs orientation: forward

Symbol	Name	Function Class
Rr562086	regulatory region 562086	1148 bp proximal