rs33031054 SNP Detail

Summary

• ID
  rs33031054
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:48403914 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGTCTATGGT CAGACTTCAC ATCCTCTTCC AGAGTCTGTC TTTGTTACAG AAAAAAAAAA
  CTGAAAGGGC TTCTTTTTAA GCTACAAATG GAAAACAGAA GGGAAAGATA AGAATCCCCT
  AAATTAGTGA TTTCTTTTAA AGAACTTCTA GGCCAAAAGG ATGGCTCTGC GGATAAAAGC
  ACTTACTGCA CAAGGCCTGA GCTCTGTCCC CAGAGCCTGC AGTAGGAGAG AACCAACTCC
  TGAAGGCTGT TCTCAGATCT CTGTGTACCA TGGCACTTGC TCACCCACAT CCTCACACGC
  R
  CACACACACA CACACACACA CACACACACA CAACACACAC CCCACATCAT ATCATCGTCA
  ATCAATAATT AAAAAGAAGG ATTTACTATA ACAATGTTAC TTCCTAGCTG CTCTCTTTGT
  AAAGAAACAA TGGAAAAATG GAGGGAGTGG TGGCCTGCTT CTGTTTCCAT AGCAGTGCAC
  ATGGATGTAC ACATGTAAGA AGCTGGCATT GCTGCTTATG CTTATTGACA TTCTGGCTTG
  GGCATTCTGC TGAGCCCATC ATCCCGTCCC CATGTGGCAG GTCCAATTGT ATGTTATCTC
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss45728700	mCV23268764	ABI	CRAMUS_MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs33031054					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:48403914 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm68641	predicted gene, 68641			631 bp upstream
Invs	inversin			Intron
				Noncoding-Transcript-Variant
Rr591970	regulatory region 591970			642 bp distal
Rr591971	regulatory region 591971			343 bp distal