rs33029511 SNP Detail

Summary

• ID
  rs33029511
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148148959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCCACAGG CACTCGGTGA
  AGTGGGCACA GTCTTATTCC TGGTTTACAG ATGGCCAACC ACAGACCGAG AGTACTTAAG
  TGGCTTGCTC AAGATCCACA CAGCAGAAGA TAAAAGAGCA GAGACCCACC CAGTCCTAGG
  TGTACCCTCC GTGATCCAAT CCTGGGCTCT GAGATGGCTC TGGAACGGAG TGTCACTAAG
  R
  GACCCTTCTG GTCTTCTCCT CTCCCAGGTG TCCCCACCCA GTCCTTGGCT CCCTCTATCA
  GCAGGAGAGC CAGTGGCTCA GGCCACTCGC ACCAGTCCCT GGCCTCGCTC CTGGACTCTC
  CTGCACTGTC CACCATCCCG CCAGCAGCTG CTTCCACAGA CCCATCACAG CCCCACAGTT
  CCAATTCCAG GCCCAGCGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45728154	mCV23437572	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss147991162	ENSMUSSNP5609178	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs33029511					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148148959 () rs orientation: forward

Symbol	Name	Function Class
Gm13201	predicted gene 13201	within coordinates
Gm66468	predicted gene, 66468	within coordinates
Rr604572	regulatory region 604572	1329 bp proximal
Rr604573	regulatory region 604573	1467 bp proximal
Rr604574	regulatory region 604574	1705 bp proximal