rs33028783 SNP Detail

Summary

• ID
  rs33028783
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:154148014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATAGGTCC ATGGATTTAA
  ACACAAGCTA TACCCTATAG GACCATGGAT TTAAACATAG GCTATACCCC ATAGGTCCAT
  GGATTTAAAC ATAGGCTATA CCTTATAGGA CCATGGATTT AAACACAGGC TGTACCCTAT
  AGGACCATGG ATTTAAACAT AGGCTATACC CTATAGGACC ATGGATTTAA ACACAGGCTG
  W
  ACCCTATAGG ACCATGGATT TAAACACAGG CTGAACCCTA TAGGATCATG GGTTCCTACT
  GAAACTCCAC CCTGGGGGTC TCCATTATAA AGGGTGCCCT TAGGTCTCCT TGATGCACAG
  CTGACTTGGC TGGCATGTTC ACACTCAGTG AGTTCAGGGT CTGACTCTAA ACAGAGCCTC
  CTTTGAACCC CACCTCCTTC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
ss46762466	NES10938480	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ
rs33028783					SNP	A	A	A	A	A	A	A	A	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46762466	NES10938480	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154148014 () rs orientation: forward

Symbol	Name	Function Class
Rr606065	regulatory region 606065	1767 bp proximal
Trp73	transformation related protein 73	Intron