GCCCA CAGGAGCAGG AGGAGGGGGA R AAGCAGGGCC AGTGACCCTC CGTGT R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
---|---|---|---|---|---|---|---|---|---|---|
ss46225313 | mCV23951206 | ABI | CRAMUS_MOUSE | f | SNP | G | A | A | G | G |
ss145843960 | ENSMUSSNP4883206 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | A | |||
SNP Consensus Information | ||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
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rs33028086 | SNP | G | A | A | G | G |
Location: Chr8:124922996 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm42054 | predicted gene, 42054 | 296 bp upstream | ||||||
Rr672636 | regulatory region 672636 | within coordinates | ||||||
Rr672637 | regulatory region 672637 | 604 bp proximal | ||||||
Tssr80021 | transcription start site region 80021 | 848 bp upstream | ||||||
Tssr80022 | transcription start site region 80022 | 882 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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