rs33022021 SNP Detail

Summary

• ID
  rs33022021
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165470982 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTTGTTTT GTTTTATTTT
  TAAATCCCTT GATCAAGCTG TGCCTGAAGC CATCATCTTC GGGTTTCTAG CTATGTGAAT
  CAGTAAGTCC TCCTTTTAAT TTGAACCAAT TTGAGCTAAC TTTCCTGTTA TTTTCGTGGG
  AAAGGGTCCT GGCTATGTCA GGCATCTTCC AGGCAAGGGG CGGGCGGGGA TGATTTACTA
  R
  AACTCTTCGC CGCAGATGTA AATGTGTTTG CAGCAGAATC TTGCTCTGAA AAGCTGGGTC
  CTGCTCTCCC ATGACACTGT CAAGCTCGGG CCACTGTGAG AGTTCTGGAG ATGGTGCCAG
  GCAGATCCTC TCTCCCTCTG TTCCCCTGTG CCCCCAGGTG AGCACACTCC AGACCATCCA
  CAGATTGTTG CCTACACCTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45227135	mCV22847026	ABI	CRAMUS_MOUSE	f	SNP	A	G
ss148241911	ENSMUSSNP1999988	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320608518	CHEV_2_165454562	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs33022021					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165470982 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	1935 bp distal
Rr569966	regulatory region 569966	799 bp distal
Rr569967	regulatory region 569967	979 bp distal
Rr569968	regulatory region 569968	845 bp proximal