rs33020576 SNP Detail

Summary

• ID
  rs33020576
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062284 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC AAGGAGACAG CGTTAAGGAT
  R
  CTCCCTGGGG CAGGTGGGCA GGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45726735	mCV24830120	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148078617	ENSMUSSNP2880817	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33020576					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062284 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605686	regulatory region 605686	87 bp proximal
Rr605687	regulatory region 605687	832 bp proximal
Rr605688	regulatory region 605688	1019 bp proximal