rs33018499 SNP Detail

Summary

• ID
  rs33018499
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT ACGTGTGTAT GTGTACGTGT
  K
  TGTATGTATG TATGTGTGTG TATGT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45726712	mCV24222018	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss148049567	ENSMUSSNP487560	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		G
ss321428583	CHEV_4_149559835	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33018499					SNP	T	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270183 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	1289 bp downstream
Rr605217	regulatory region 605217	787 bp proximal
Rr605218	regulatory region 605218	994 bp proximal
Tssr40380	transcription start site region 40380	1690 bp upstream
Tssr40381	transcription start site region 40381	1699 bp upstream
Tssr40382	transcription start site region 40382	1717 bp upstream
Tssr40383	transcription start site region 40383	1731 bp upstream
Tssr44720	transcription start site region 44720	1664 bp downstream