rs33016880 SNP Detail

Summary

• ID
  rs33016880
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149256734 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTG GGCGTGGTGG CTTTTGTAAT
  Y
  CCTGTGCTGG GTGGTGGGTG GAGTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45726598	mCV22641654	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss148029235	ENSMUSSNP4103727	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs33016880					SNP	C	T	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149256734 () rs orientation: forward

Symbol	Name	Function Class
Rr604853	regulatory region 604853	233 bp distal
Rr604854	regulatory region 604854	within coordinates
Rr604855	regulatory region 604855	310 bp proximal