rs33015592 SNP Detail

Summary

• ID
  rs33015592
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:116726270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCCAGGTTCT CAAGATGTAG AGGAGGAGGG AAAGCAATGT TAACATCGGC TTCTGGGCTC
  CTCACACACA CACACACACA CACATGCACA TACACACACA TACACACACA TGCACACACA
  CATACACACA CATACACACG CATGCACACA CACACACATA CACACACATA CACACACACA
  CATACACACA CACATGCACA TACACACACA CACACGCATG CACACACACA CATACACACA
  CACGCGCGCA CACACACACA CACATACACA CACACATGCA CATACACGCA CACACACACA
  Y
  GCATGCGCAC ACACACACAC ACACACACAC GCACGCACGC ATGCATGCAT GCACACATGC
  ACACATACCC AACCACAAGT CTTGGGTGAG TATTTTCAAT GGAACTAACT AAAACAGAAG
  TACCAAACTC GTGCGGCAAA TGTAGGCTGA TCTCTGTGAG CTTAGGACCA GTGAGTTTCA
  GGTTAGCCAG CAACAGATCC TGTCTCAAGT GATGGTGGTG ACCTAACCTG TTAGATTGTG
  TGGAACTGTT CGACTCTGTA TAACTCTGGG TTGTATCCAA ATTCCGCATA TCCTAAATAT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45225774	mCV23824166	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T
ss147277290	ENSMUSSNP4848508	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33015592					SNP	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:116726270 () rs orientation: forward

Symbol	Name	Function Class
Gm46758	predicted gene, 46758	within coordinates
Rr563025	regulatory region 563025	1261 bp distal
Rr563026	regulatory region 563026	1710 bp distal
Rr563027	regulatory region 563027	1015 bp proximal
Rr563028	regulatory region 563028	1254 bp proximal