rs33013153 SNP Detail

Summary

• ID
  rs33013153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:97374829 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAGAAAGCAC AGGCAATACC
  TGTGCTGTGG AAATAGAGTA AAGAATTTTA ATTAAAAATC GATTGTGAAT GAGATTGTTT
  AATTATTCTC AAAATTGCGC TGCTGGTAGT AGTACACACA AAATGAGTAG CAGAGGGATC
  ATCGCAAGCA CTAAGCGGAG TCATTTGAAA GGGAAATAAA TTAAGCATTT GGCACTGAGT
  R
  ATACATTGAT CTTATGGGTT AATGTTAATT ATGAAGGTGT TACCCAGGGC CATGAGGCTA
  TTCTGCACCA GAGTGTGTAC AGGAAATCTC TGTGGAGTGC CCACAACAAT TCACATATGA
  AATATGAATC CTCCAGCTTA CCAATTACTC TCAATTCATT TTTTTCCTGG TATAGTTGAA
  TCACTGACTA GATACAATAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45225283	mCV23175850	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33013153					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:97374829 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Lrrc4c	leucine rich repeat containing 4C			Intron
				mRNA-UTR
Rr561454	regulatory region 561454			within coordinates