rs33012780 SNP Detail

Summary

• ID
  rs33012780
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:22035883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTAGAAAAGC CACTGTGCAT ATCATGAGTA TGTATTAAGT
  ATCAATTAAT GAAAGAGCCT AATTGTCAAC TATTATTTTG CACAATTTGG TTTTTTTTTT
  K
  AATTTGCTTT TATTTTAATG TGACTAATTA ATTGGTGACT TCCCAGCCTC TCACTGGTGG
  ACTTGGAAAA GAGTAGCATT TGGTATGGTC ATCCTATTG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45225548	mCV23556609	ABI	CRAMUS_MOUSE	f	SNP	T	G	T	G
ss146357471	ENSMUSSNP3553355	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33012780					SNP	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:22035883 () rs orientation: forward

Symbol	Name	Function Class
Rr552732	regulatory region 552732	995 bp distal