rs33011974 SNP Detail

Summary

• ID
  rs33011974
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:152082837 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTCGAGGCC AGCCTGGTCT
  ACAGAGTGAG TTCCAGGACA GCCAGGGCTA CACAGGGAAA CCCTGTCTCA AAAAAGTGCC
  ACACTATACT AGCATGATAA TGCATACCTG TAAGCCCAGA GTCTGGGAGA TAGAGGGGAG
  AGAATCAGGA CTACTGGTCA ACCTTGGTTC CCTAAGAAGC CTGAGGCCAG CCTGGTTGTC
  M
  CAAGACCCCA TCTCAAGATG CAGACACAAA CCAAGAAGTA AATGACCACA CCTGATCTTT
  ATTCCTTGTG CTAAAAATTT CACAGTAAAC AGCCAAGTCG TCCTCACACT AAGAAACTGG
  CGGAAGGACT GGGCTCAGGG GTTGAGAGTA AGCAGTAAGT TGCAGAGGAC TTGAGCTCAG
  ACAACCCACA CCGAGTGTAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45725652	mCV22817349	ABI	CRAMUS_MOUSE	f	SNP	A	C	C	C
ss148078747	ENSMUSSNP50593	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33011974					SNP	A	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152082837 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15382	CpG island 15382	1221 bp distal
Gm69399	predicted gene, 69399	861 bp downstream
Rr398892	regulatory region 398892	1891 bp downstream
Rr605704	regulatory region 605704	1632 bp distal
Rr605705	regulatory region 605705	1637 bp distal