rs33011862 SNP Detail

Summary

• ID
  rs33011862
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150270465 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTCC ATTTGTCATT CTCTGGGCTC
  R
  AAACATGCTT AAGCGTGTAG ATAAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45726216	mCV24222030	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148049582	ENSMUSSNP6167155	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		A
ss321428587	CHEV_4_149560117	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33011862					SNP	G	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150270465 () rs orientation: forward

Symbol	Name	Function Class
Car6	carbonic anhydrase 6	1007 bp downstream
Rr605217	regulatory region 605217	505 bp proximal
Rr605218	regulatory region 605218	712 bp proximal
Tssr40380	transcription start site region 40380	1408 bp upstream
Tssr40381	transcription start site region 40381	1417 bp upstream
Tssr40382	transcription start site region 40382	1435 bp upstream
Tssr40383	transcription start site region 40383	1449 bp upstream
Tssr44720	transcription start site region 44720	1382 bp downstream