rs33009638 SNP Detail

Summary

• ID
  rs33009638
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:150687207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGAAAGAC CCATACATTG
  TTTTTCTTGC TGTTTCTACC TATAAAAGGT CTACCCTGAA GCTACTCTCA CACTGCCCTG
  CTGGTGAAGG GCTGCCTCCC TCTGACTCCT TCAGGCTCTC TCACAGGCAA CCCAAAGAAG
  CATAGAAAAA GGGACCCTGT TATTTTCCAA ACAATGCTCT TCTTTCAAAA AGGCACCTCC
  M
  TATGCCCATT GCGAACAACA TGCTGTGGTA TAAAAAGAAC GTGGGCTTTT CAGGTGGGAG
  AGCAGCTCCA GCTTAAGCCA GACTCAAATT CAAGGCCTTA AACCCACTCA CGAGAAGCAT
  TTGGGATAAA ATAGAAAGGC TCAAATGGAC AAAGTGTGTA CTTTTTCAAC AGCCCATTAG
  GACACACTGA TGTTACTGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45225132	mCV24552149	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	C
ss147951649	ENSMUSSNP3052910	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33009638					SNP	A	A	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:150687207 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Abhd12	abhydrolase domain containing 12			Intron
				Noncoding-Transcript-Variant
Rr567118	regulatory region 567118			111 bp distal