rs33009313 SNP Detail

Summary

• ID
  rs33009313
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:153991191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTGGGGA CCCAGCATTA
  GGTCAAACCC ACTACACAGC TGCAGTCAAC CTGTTGCGCT ACCGTCCTGC CTGGTCCATG
  CTTGCTGTCT CTGCCTCTAT TTCTCAGTAC CAGTTACCAG GCAGCAGCTG CACTCCAGTT
  CTAAGCCAGG GCTCTGCTCC TGTGGAAACC CAGAGTGATC CACAGTGTAG AATACATGAG
  R
  GTTCTGAAGA AAGGATCTTT GGTGTGCTTG GCAACCCCCC CACACACACA CACACAAACA
  CACACACCAG AATACTCAAG ACCATTTATC ATTAAATCCT TGGCACAGAA CCTTCAATAT
  GGATCTGGTC AGTTATCAAC AAAGACCTCA TCATAATGTA GTCACTGATG TCACTTGAGT
  TAGGCCTCTC AGGCTTAACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	C3H/HeJ	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
ss46760357	NES10942149	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	C3H/HeJ	FVB/NJ	KK/HlJ	PWD/PhJ	WSB/EiJ
rs33009313					SNP	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46760357	NES10942149	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:153991191 () rs orientation: forward

Symbol	Name	Function Class
Gm13115	predicted gene 13115	652 bp upstream
Rr606029	regulatory region 606029	826 bp proximal