rs33008013 SNP Detail

Summary

• ID
  rs33008013
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:134907658 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCCT TGCTGGAACC TAAGCCTTCT
  Y
  GGTGCTCTAA TGCCTGCCTG CCATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45725263	mCV24993549	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss147540925	ENSMUSSNP4540385	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T	C
ss321351104	CHEV_4_134736262	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33008013					SNP	C	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:134907658 () rs orientation: forward

Symbol	Name	Function Class
Rr601942	regulatory region 601942	684 bp distal
Rr601943	regulatory region 601943	1190 bp distal
Rr601944	regulatory region 601944	1480 bp proximal