rs33005162 SNP Detail

Summary

• ID
  rs33005162
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149931030 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCAA GCAACATTAG GCAAGCTACG
  R
  TACCAACTGA GCCTCGGCCC CAGCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45725111	mCV25152800	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss148041545	ENSMUSSNP2675030	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss321426963	CHEV_4_149220682	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33005162					SNP	G	A	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149931030 () rs orientation: forward

Symbol	Name	Function Class
Gm54270	predicted gene, 54270	within coordinates
Rr605078	regulatory region 605078	1106 bp distal
Rr605079	regulatory region 605079	164 bp proximal