rs33005158 SNP Detail

Summary

• ID
  rs33005158
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:129886978 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAA GGAGACAGAG CCCAGGAGCC
  K
  GGAGGGCATC TCAGGCAGAT GGAGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45725105	mCV25082828	ABI	CRAMUS_MOUSE	f	SNP	G	T	G
ss147456659	ENSMUSSNP441103	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
ss321316422	CHEV_4_129670429	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33005158					SNP	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129886978 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Adgrb2	adhesion G protein-coupled receptor B2			Intron
				Noncoding-Transcript-Variant
Rr600410	regulatory region 600410			71 bp proximal
Rr600411	regulatory region 600411			956 bp proximal