rs33000359 SNP Detail

Summary

• ID
  rs33000359
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150299503 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACCAGTCT GGCCTCCAGT
  TCACAGAGGT CCACCTGCCT CTGCCTCCCT GTCACTGGGA TTAAAGGTGT GAGCCACTAC
  TGCCCAGCTT TCTTTTATGT TTTTAGGATT TATTTATTAT TATTTTATTT GTATGTCTGT
  GTGAATGTCT GCTACGGGGT ACAGATGCCT AAGGAGGCCA GGAGAGTGTG TTGGATTCCT
  Y
  GGAGCTGGAG TCACAGCTTG TCACAGAGTG TCCCAACATG GATGCTGGCA AGGGTCTTCT
  GCAAGAGCAA ATGCTTTTAA CCACCTCGCC ATCTTACCAG CTCTTGTCTT ATCTTTCTTT
  CTTTCTCTCT TTCTTTCACT TATTTATTTT TATTTTATGT GCATTGGTGT TTTGCTTGCA
  TGTATGTCTG GGTGAGGGTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45723571	mCV24961534	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss148050358	ENSMUSSNP5072659	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33000359					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150299503 () rs orientation: forward

Symbol	Name	Function Class
Rr605224	regulatory region 605224	1913 bp distal
Rr605225	regulatory region 605225	1176 bp distal
Rr605226	regulatory region 605226	860 bp distal
Rr605227	regulatory region 605227	919 bp distal