rs32999456 SNP Detail

Summary

• ID
  rs32999456
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152070237 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTG AAGTGTTCCG AGCAGATGAC
  Y
  GTGTGCTGCT TAGGCTTGAA GTCAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45724118	mCV24830059	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss148078697	ENSMUSSNP4892760	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs32999456					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152070237 () rs orientation: forward

Symbol	Name	Function Class
Rr605694	regulatory region 605694	1337 bp distal
Rr605695	regulatory region 605695	1304 bp distal
Rr605696	regulatory region 605696	95 bp proximal
Rr605697	regulatory region 605697	290 bp proximal
Rr605698	regulatory region 605698	954 bp proximal
Thap3	THAP domain containing, apoptosis associated protein 3	Coding-Synonymous