rs32995467 SNP Detail

Summary

• ID
  rs32995467
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:102389020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGAGTTAG TGTTCCATAG
  AGTATAGTTG TAAAAACTTT AGTCTCTCAC TCAAAAGGAA TAGACCATTG AAGACTATCT
  TACCACTACA GAAGAAAGAG CAAAGGGGGC ATTTTAAAGT CCAAACAAGT ATAGGCTTCT
  TTATGTACTT TTTAATAAAA AGTACGGGCA GAATCTGATG TTGTTGCTAC TAGTACTTGC
  Y
  AAGATGTTGG AAGATTGCTA CAGAAGATGA TGCATCCATG GTCCTGTAAA AAAATCTGGC
  TAGCATTGAG CAGCATGCCA TTCAAGTTGC TTTAAGCAAT GTGACTGGCC TGGGATTGTT
  GGGCACTCTG GGGTGTGAAT CTGATTAATG AATACTCACA CTGATCTGAT AGTTCTGAGG
  ACTGAGAAGC CTTGTGACTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	LG/J	SM/J
ss45223790	mCV23730714	ABI	CRAMUS_MOUSE	f	SNP	C	T
ss147115654	ENSMUSSNP4469693	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss320438852	CHEV_2_102398832	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	LG/J	SM/J
rs32995467					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:102389020 () rs orientation: forward

Symbol	Name	Function Class
Pamr1	peptidase domain containing associated with muscle regeneration 1	Intron
Rr561705	regulatory region 561705	263 bp proximal