rs32995354 SNP Detail

Summary

• ID
  rs32995354
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:189133333 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTAATCC ATTCATCTCT
  CCATTTCTCT CCATGCCTCT TACACCTGAA AGATGATCAG TTCAATGGAG AACATGGCCA
  GCATCTCAGC TGCCTGTTCA GCCTGAGCAA AGGGTGAACA CGCTGACTTA TCCTGTGTTC
  CAGCACACAG GCAGGCTTCA GGACCTTACA TACTGGACTG GAAACTATGC TATGCTACAG
  M
  CTGGGCTGCT CCCAGGAGAC ACCCTTCCAA AGAAACAATA AATCAAGAGA AGAATAACCA
  ACGTGCAATA AACTCAAAAT TTGACTTTTA AAGGAACCCC TTACTGAAAA GGGCAATACA
  ATGTGATTCC ATAATTATCT AATCCTCTGA AACGTACAAC TCAATCACAC TCATGAATGA
  ATTTACAGAG TGAATCGAGA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46757379	NES10640340	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32995354					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46757379	NES10640340	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:189133333 () rs orientation: forward

Symbol	Name	Function Class
Kcnk2	potassium channel, subfamily K, member 2	Intron
Rr425790	regulatory region 425790	1067 bp proximal
Rr425791	regulatory region 425791	1840 bp proximal
Tssr15714	transcription start site region 15714	1612 bp downstream
Tssr15715	transcription start site region 15715	1626 bp downstream