rs32990836 SNP Detail

Summary

• ID
  rs32990836
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:138815192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AACAC CCAGCAGCCA GCATCTAACA
  Y
  CCAGCACCCA GCATTCAACA TCCAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45722548	mCV24615873	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	C	T
ss147665081	ENSMUSSNP1132476	ENSEMBL	ENSEMBL_Sanger	f	SNP		C			T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32990836					SNP	C	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138815192 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nbl1	NBL1, DAN family BMP antagonist			Intron
				Noncoding-Transcript-Variant
Rr398632	regulatory region 398632			1496 bp downstream
Rr603100	regulatory region 603100			1328 bp distal
Rr603101	regulatory region 603101			1623 bp distal
Rr603102	regulatory region 603102			568 bp distal
Rr603103	regulatory region 603103			1177 bp proximal