rs32988887 SNP Detail

Summary

• ID
  rs32988887
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142326433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACTGAGGGA GTCATGACTG
  ACATGGGGAC ACATGGCATT CCCACTTCAG GAGGAACTGC TGTTCGACTC TAGGAGAGAC
  TGATGGAAAC TTTGCAACTT CCTGTGAGAG ACAAAATATT CCCTTGTCCT ACTAACATTT
  TGACACCAAG GATACAATAA ACTATAATTT AAAATAAGCA AACAACAACA AAAACACAGG
  K
  AACTTGGAAA TTTTACAAGT ATTTGACAAC CAAAACATAA TACACCAATT AATATCCATG
  AATGAAAGAA GAATCAAGAT GGAAATTAGA AAATATAGTG ATCAAAAATA AAACTACAAT
  ACTTCACAAG ATAAAAGGTG CTGTTAAAAC AGTTGTCATG GAAAAATGTA ATCACATTTA
  TAATCACAAA CACCATAAGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45222352	mCV22352579	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss147732285	ENSMUSSNP2985970	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T
ss320531574	CHEV_2_142310249	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs32988887					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142326433 () rs orientation: forward

Symbol	Name	Function Class
Rr566216	regulatory region 566216	1470 bp proximal