rs32987654 SNP Detail

Summary

• ID
  rs32987654
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:75910549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTCAAGGTTT GTTTTTCAAA AAAGAAGAAA AATTTTGAAC
  AGAATCTGTC TGTTTGTTTT AACTGCTTCT TGCTCTCAAC TGGTTTTAAA AGTTATAAAA
  Y
  TAAAGATGAA TGCATCTCCA CCTCACTTTA CTTCTTGGAG ATGTTTACAA AGGCGACACA
  TATAAGGATT AGAAGCATAA GTGATCACTA GTTCATTAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45722341	mCV24421541	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss146575011	ENSMUSSNP4200581	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs32987654					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:75910549 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ptprd	protein tyrosine phosphatase receptor type D			Intron
				Noncoding-Transcript-Variant
Rr594062	regulatory region 594062			143 bp distal