rs32987421 SNP Detail

Summary

• ID
  rs32987421
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180086037 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTCTCCTCA GCCAAGCATG
  AAACCTGCTG TCCAGAACCC CACCCGTCAT AATAGCCCAA TGTCAATTCA GCCAGTCAAG
  GCCAAACGCC AAGCACAGGT GAGCGCTATT TACTGTATCT AAGCCCAGGG GCCCACCGGG
  GTGCTGCAGG CCTCACTTCT GGTGGCTCCT GCCCCTGCTT TGCAGCAGCT TGTTATACCA
  R
  TGCACACCTT GGTTATCCAA CGTGCTCAAG GAGCCAGCAT CTGTCCTTCG GTCCTGCTGT
  ATTTTGCAAT GTAGTCTTAT TATCACCTTG AGTTGGTCCG TGTCTAGACT TTCAACTGCC
  TGAGCTCTGT GGGAGACTGG CATTCCAAGA ACCTAGGATT AGCCCACAGC AAGGGGCAAT
  GCCTCTTTAA TGACACACAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45222504	mCV22939294	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss148391766	ENSMUSSNP2601154	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		G
ss320632138	CHEV_2_180178949	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32987421					SNP	A	G	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180086037 () rs orientation: forward

Symbol	Name	Function Class
Gm75546	predicted gene, 75546	within coordinates
Rr397580	regulatory region 397580	231 bp downstream
Rr572757	regulatory region 572757	874 bp proximal
Tssr22237	transcription start site region 22237	1967 bp downstream
Tssr22238	transcription start site region 22238	1180 bp downstream
Tssr22239	transcription start site region 22239	191 bp downstream
Tssr28110	transcription start site region 28110	410 bp upstream
Tssr28111	transcription start site region 28111	311 bp upstream