rs32984508 SNP Detail

Summary

• ID
  rs32984508
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58207416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGCAGAATCC TGAGAACCTG TTCAGATCTC AGGCTGTTGA AGTGGGTGGG GCCCACCCGT
  GCGCATCACA TACGCAGAGT TATCGTTCAC CTTTCCCGCG GTTAATCATT CCTGTATTGT
  TCATTCTTTC CTCCACGTAG CAGCTTGCGA TGCTCTATAG GTAACACGAG CAGGGGAAAA
  CTGACATGGA CCTGTCCTCT AGGAACCTGT AGCAGGTAAA AGTGATGTCA CCATCAACTT
  GATATTCATA CGTGAAACGA ATATGTATGA TTACACATGT TTATGTGTAT CACATATGTA
  K
  ATATATATAT GTATATATGT GTGTATGTAT ATATACATAT ATATATGTAT ACACACACAC
  AAAATTACAA CTGACCTTGC TTAAACAGAA GTTTGTCTTG CTTTCAAAGG CAAACTTGAC
  TTTAGCCAAG GCCAGGCAAG CCTTCTATGA GGACAGAAGT TTATGCTAAA TTTTGAACTA
  TAAGTAGACA CCCTGTGATA TTAACACCCT CCTCTTTTTA TTTGATGCAA CAGATTAGAT
  CGTCCTGGCA TATATACCCT TTGGAATACC AGCTGCTACT TGGAGTGATT TTTCCAATTA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45722141	mCV24832998	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32984508					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58207416 () rs orientation: forward

Symbol	Name	Function Class
Cpgi14336	CpG island 14336	766 bp distal
Rr592872	regulatory region 592872	330 bp distal
Rr592873	regulatory region 592873	753 bp distal
Svep1	sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1	820 bp upstream
Tssr41870	transcription start site region 41870	1082 bp upstream
Tssr41871	transcription start site region 41871	1057 bp upstream
Tssr41872	transcription start site region 41872	896 bp upstream
Tssr41873	transcription start site region 41873	872 bp upstream
Tssr41874	transcription start site region 41874	841 bp upstream
Tssr41875	transcription start site region 41875	829 bp upstream
Tssr41876	transcription start site region 41876	800 bp upstream
Tssr41877	transcription start site region 41877	768 bp upstream
Tssr41878	transcription start site region 41878	743 bp upstream
Tssr41879	transcription start site region 41879	719 bp upstream
Tssr41880	transcription start site region 41880	626 bp upstream