rs32982942 SNP Detail

Summary

• ID
  rs32982942
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:92257764 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACACACA GTGGTGCTCT
  TTAACACCTC TATGCTTGGC TTTAAAGTTT GTGTTGCAGA TGTTGGTCAC CAATTCAGGG
  AAGTCTAATG ATTCCATTTT TTTCAATATC AATTTTTTCA CATGTTCACT TCTATCTGTG
  TACACCATTG TGTTAAGAGT CTTTTAAAAA TATCAAAATA AGCACCTAAA ACTTTTTAAT
  Y
  GGAGATTTCC TTTTCATTTT TAATGTAATT TCAACATAGT GTACATAATG AGCGGGTGTC
  ATGATTCATG CAAACATTCC TGACAGTTCA AATGAAGGTC GGTATATTCC ACACTTACAA
  AGTGACCACC ATTTATAGTG AAAACATAAT CCTGTCACGT AGAGATTTAA CAATATAAAA
  AAACTTCATT GAATTTATCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46755714	NES10731504	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs32982942					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46755714	NES10731504	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:92257764 () rs orientation: forward

Symbol	Name	Function Class
Sprr2e	small proline-rich protein 2E	1686 bp upstream
Tssr30284	transcription start site region 30284	1684 bp upstream