rs32980739 SNP Detail

Summary

• ID
  rs32980739
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:164716052 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTGT CCTCCACGAA TGAATCTGGA
  R
  CAGCATTGCA AATCAAGGCC CTGGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45221692	mCV23132232	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	A
ss320607020	CHEV_2_164699632	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs32980739					SNP	G	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:164716052 () rs orientation: forward

Symbol	Name	Function Class
Gm75526	predicted gene, 75526	within coordinates
Rr569744	regulatory region 569744	1943 bp distal
Rr569745	regulatory region 569745	within coordinates
Rr569746	regulatory region 569746	333 bp proximal
Rr569747	regulatory region 569747	1706 bp proximal