rs32977789 SNP Detail

Summary

• ID
  rs32977789
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136641337 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGGTCTC CTTTAATCTG
  AATGTTTCCC TTTACACCTT TCTTTCTCTC TGTGGGTATA TGTGTGGTCA GAGCAGGATA
  CAGGGTATCT TCTTCTAGGA CTTTCTGCCT CATTGCTTTG AGACAGGCAG GGCCTCTCGC
  TGAGCCTGCA GCGTCACAGT TCAGCTAGCA CAACTGACTG CTGAGCGCCC AGGTTCCCCC
  R
  TCTCTGTCCC CACAATGTTG GGGCTACGGA CACACCCCCT CATGCCTAGC TTTTTATCCT
  AAAATGTATT TTATTCGTGT GTATGTTCAT ATGTCGGTAT GAAAGCCTGC CCTGTGTGTT
  GGTACCTGAA GAAGCCAGAA GAGGGCGTCA GATCCCCTGG AGCTCTAAGT TACAGGCTGT
  AAGCCACCAC TGTGTTGGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45721494	mCV22557244	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss147585082	ENSMUSSNP1562969	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32977789					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136641337 () rs orientation: forward

Symbol	Name	Function Class
Gm69228	predicted gene, 69228	1059 bp upstream
Rr602498	regulatory region 602498	872 bp distal
Rr602499	regulatory region 602499	131 bp proximal
Rr602500	regulatory region 602500	717 bp proximal