rs32974820 SNP Detail

Summary

• ID
  rs32974820
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148965962 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC ACTCCAGCTT TGGGGCTTGG
  R
  GCCAGGAGTC TCTGGAAGGC CGGTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45720822	mCV22998034	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	G
ss148022133	ENSMUSSNP689181	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32974820					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148965962 () rs orientation: forward

Symbol	Name	Function Class
Casz1	castor zinc finger 1	Intron
Rr604785	regulatory region 604785	1860 bp distal
Rr604786	regulatory region 604786	within coordinates
Rr604787	regulatory region 604787	959 bp proximal