rs32967822 SNP Detail

Summary

• ID
  rs32967822
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:71698309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTCCACTGC TTCCCCCAAG
  CTTTTCTGCT AAACCCGTCT TCATGGATCA TAAATTCTTG GTAAATTTAG AGTCTGGCTC
  AAGTCTGCTA AATTAAGGAG GAGGAGGGAT TATAAGTATG GCACATTGTG GCACATGCCT
  TTAACCCCAG CATTCAGAAG ACAAACACAG GTGAATCTAT CGAGTTTGAA GTCAGCCGGA
  K
  ATCATACACA GTGAGATCCT GTCTATAAAT AAATAAATAG AATTTTAAAA AAGGATTATA
  TAAAACATCC CACATAGATG AGTAACACAG CTCTTTTTTA ATGTCCTCTT CAGCACCAGG
  ACTTCTTAAG TTAGAAACAA AAAGGTAAGA TGAGGGGACA GGGAGAAGGA AGGAGAGAGA
  ATGTGACAGA CTATGTATGA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45219119	mCV25090490	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss146751469	ENSMUSSNP6216349	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs32967822					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:71698309 () rs orientation: forward

Symbol	Name	Function Class
Gm74965	predicted gene, 74965	413 bp upstream
Gm75575	predicted gene, 75575	515 bp upstream
Rr370575	regulatory region 370575	within coordinates
Rr558852	regulatory region 558852	1727 bp distal
Rr558853	regulatory region 558853	424 bp distal
Rr558854	regulatory region 558854	within coordinates
Tssr18292	transcription start site region 18292	1833 bp downstream
Tssr18293	transcription start site region 18293	206 bp downstream
Tssr18294	transcription start site region 18294	542 bp upstream
Tssr18295	transcription start site region 18295	549 bp upstream
Tssr24499	transcription start site region 24499	381 bp upstream
Tssr24500	transcription start site region 24500	341 bp downstream