rs32966554 SNP Detail

Summary

• ID
  rs32966554
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:148169576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGC TGGCCTCGAA CTCAGAAATC
  Y
  GCCCGCCTCT GCCCAGCTGG TCTGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45719142	mCV24934787	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147991861	ENSMUSSNP1555138	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss321416941	CHEV_4_147459228	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs32966554					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148169576 () rs orientation: forward

Symbol	Name	Function Class
Agtrap	angiotensin II, type I receptor-associated protein	Intron
Rr377389	regulatory region 377389	within coordinates
Rr604582	regulatory region 604582	49 bp proximal
Rr604583	regulatory region 604583	1871 bp proximal
Tssr40250	transcription start site region 40250	733 bp upstream
Tssr44578	transcription start site region 44578	825 bp upstream